Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015804041.1_cds_XP_016487212.1_7759
CDS Infomation

[gene=LOC107807365] [db_xref=GeneID:107807365] [protein=protein FAM188A-like] [protein_id=XP_016487212.1] [location=complement(join(23007..23825,23947..24018,24328..24513,25047..25170,25732..25883,28072..28150,30923..31374))] [gbkey=CDS]
Sequence

ATGGCGGATCAAGAAGATGAAGAGTTAAAAATGGCGTTAAGGATGAGTATGCAGAAGGAG
TCACCGGAGCCAAAGAGGAGCAAACCGGGAGAGGAGGTCGCCGGTGCCGTTGGGGAAGAA
GGGGAGTCGCCGGAGTTGAAAAACCGGCGACTGCAGAGGGAATTGATGGCTGCTGCTGCT
GAAAAGCGGATGATAGTGGCGGCCAAGAATGTGGCGGAGCCGCTGGCGGAAAAGAGTGTT
GGGTCTGGTAGTGGGGTGGTGGAATGTAAGGATAAAAGTGTGGATTTGGTGAAGGGTGAG
GATAAAAATGTGAATTTGGTGAAGGCTGAGGAGAAAAATGTGAACTTGGGGGAAGAGCTT
TCAGTTGCAGAGGCTAATGAGTTATTTTCAATGATCTTTGGTTGTGAAGTTACCAGAGAT
ATTCTTGGTCAGTGGACTAATCAGGGCATAAGATTTAGTCCTGATCCAGATACATCAATG
GGTTTAGTGCAGCATGAAGGTGGGCCATGTGGTGTGCTAGCAGCAATACAGGCTTTTGTT
CTGAGATACCTATTGTTTTTCTCGGAGGAATTAAATATTGTTTCACCTAGCTTGTCCGCC
AATGTTGGTTTGAGAAGATTGGCTGACAAAGAATCTGCTGGAGCTGATATTTTTTCATCT
CTAAGTGAAGAGAAAAAATCAAGAGCATTGGTCAGAGGCATGGGTGAGATATTGTTTATG
TGCGGAAGCAATAGAAGGGTTGTGATAGCATCTTTGAGAATACTTGATGGTAACCTTGAT
GCGTCTGAGGGGCATTCGAGTGATGAGGTCATTTCTAAAGCACTTGAAGGTCTCTCACTT
GAATCCGGGGCTAACTTGCAAAAGGTTTTAATCATTAACACATATACATCATCAGTAGAT
GCCCTTCAAAGACTTGAAGCACTGCTCCCAGTATTCCGAAGTCGTATGGGAGCAATGCTG
TTCCTAATATCAGCTCTGCTTTCTCGTGGAATGGACTCTGTTCAAGCTGATAGGGATGAT
CCTTCTCAACCTTTGGTTACAGCACCTTTTGGACATGCTTCACAGGAAATTGTGAACCTC
TTGCTTTCTGGGGAAGCAGTTGCCAATGTGTTTGATGGGAGGATGGATTTGGGTGGTGGC
ATGTTTGTGAAGGGTATCTCCACAATGGTGGAAGTTGGGTTTCTTACTCTGCTAGAGTCC
CTAAACTTTTGCAAGGTTGGCCTGCATTTGAAATGCCCGAAATGGCCAATATGGGTTGTT
GGCAGTGAATCTCATTACACTGTCTTATTTGCTCTTGATACGAAAGTTCAGGAGGAGAAT
GAACTTGAAAGCAGGGAAACAAAGATCCGTAGAGCTTTTGATGCACAAGATCAAAGTGGA
GGTGGTGGATTCATTAGCGTGGAAGGTTTTCATCAAGTCCTTAGGGAGACTAATGTCAGT
CTTCCCACCGATAAGCTTCAAAACCTCTGCAGCAGTGGATATATTGTATGGAGCGAATTC
TGGCAGGTTCTATTAGACTTGGACAAGTGTTTGGGAGGACTAAAAGATCCTAGTGGATTA
ATGGGGAAAAAGGTCTTTGATCTTTACCACTTCAATGGGATTGCAAAATCGGTTATGAAT
GGAAACCAGGTTTCATCTTTAAATGATTTTCCGGTACAAAGGCCTAGACTCACTAAGTTG
AGGGTTTCAGTTCCCCCAAGATGGACGCCGGAGGAGTTCATGTCTTCAGGCCCCGGTACA
AGTGATCCTACTGCAGGTAAGGATTCTGTTACTGAAGTTTCAAAACCGGAACCTTCTCAG
CATGCTCCTTTGGTTGACTGCATCCGGACACGCTGGTCCCGAGCCACATGTACTTGGGAA
GGTGATGCACCAAGCATAGTTTGA

Peptide Sequence

PEP ID

XP_016487212.1
PEP Infomation

PREDICTED: protein FAM188A-like [Nicotiana tabacum]
Sequence

MADQEDEELKMALRMSMQKESPEPKRSKPGEEVAGAVGEEGESPELKNRRLQRELMAAAA
EKRMIVAAKNVAEPLAEKSVGSGSGVVECKDKSVDLVKGEDKNVNLVKAEEKNVNLGEEL
SVAEANELFSMIFGCEVTRDILGQWTNQGIRFSPDPDTSMGLVQHEGGPCGVLAAIQAFV
LRYLLFFSEELNIVSPSLSANVGLRRLADKESAGADIFSSLSEEKKSRALVRGMGEILFM
CGSNRRVVIASLRILDGNLDASEGHSSDEVISKALEGLSLESGANLQKVLIINTYTSSVD
ALQRLEALLPVFRSRMGAMLFLISALLSRGMDSVQADRDDPSQPLVTAPFGHASQEIVNL
LLSGEAVANVFDGRMDLGGGMFVKGISTMVEVGFLTLLESLNFCKVGLHLKCPKWPIWVV
GSESHYTVLFALDTKVQEENELESRETKIRRAFDAQDQSGGGGFISVEGFHQVLRETNVS
LPTDKLQNLCSSGYIVWSEFWQVLLDLDKCLGGLKDPSGLMGKKVFDLYHFNGIAKSVMN
GNQVSSLNDFPVQRPRLTKLRVSVPPRWTPEEFMSSGPGTSDPTAGKDSVTEVSKPEPSQ
HAPLVDCIRTRWSRATCTWEGDAPSIV

Transcript Sequence

Gene sequence data has not been registered.